Variant position: 33 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 655 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human LQEIVAHASNVSSLVLGKAS GRLLATGGDDCRVNLWSINKP
Mouse LQEIVAHASNVSSLVLGKAS GRLLATGGDDCRVNLWSINKP
Chicken LQEIVAHSSNVSSLVLGKST GRLLATGGDDCRVNVWSVNKP
Xenopus laevis LQEIVAHGCSVSSVVLGRSS GRLVATGGDDCRVHLWSVNKP
Xenopus tropicalis LQEIVAHGSSVSSVVLGKSS GRLVATGGDDCRVNLWSVNKP
Zebrafish LQEIVAHSSNVSSLVLGKSS GRLLATGGEDCRVNIWAVSKP
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 655 Katanin p80 WD40 repeat-containing subunit B1
18 – 58 WD 1
1 – 300 Interaction with centrosomes
1 – 284 Interaction with dynein
Katanin p80 regulates human cortical development by limiting centriole and cilia number.
Hu W.F.; Pomp O.; Ben-Omran T.; Kodani A.; Henke K.; Mochida G.H.; Yu T.W.; Woodworth M.B.; Bonnard C.; Raj G.S.; Tan T.T.; Hamamy H.; Masri A.; Shboul M.; Al Saffar M.; Partlow J.N.; Al-Dosari M.; Alazami A.; Alowain M.; Alkuraya F.S.; Reiter J.F.; Harris M.P.; Reversade B.; Walsh C.A.;
Cited for: VARIANT LIS6 TRP-33;
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