Variant position: 1567 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1749 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human AQSVKQLETVAARLSVSLLR HTQLLPVDKAFYEAGIAAKAV
Mouse AQSIKQLETVAARLSVSLLR HTQLLPADKAFYEAGTAAKEV
Rat AQSIKQLETVAARLSVSLLR HTQLLPADKAFYEAGTAAKEV
Zebrafish AKGIDQLSSVAAKLSISLLR HTELIPADKAFYEAGLAAKAV
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 1749 Intraflagellar transport protein 172 homolog
533 – 1749 Missing. In isoform 3.
1526 – 1749 Missing. In isoform 2.
Mutations in IFT172 cause isolated retinal degeneration and Bardet-Biedl syndrome.
Bujakowska K.M.; Zhang Q.; Siemiatkowska A.M.; Liu Q.; Place E.; Falk M.J.; Consugar M.; Lancelot M.E.; Antonio A.; Lonjou C.; Carpentier W.; Mohand-Said S.; den Hollander A.I.; Cremers F.P.; Leroy B.P.; Gai X.; Sahel J.A.; van den Born L.I.; Collin R.W.; Zeitz C.; Audo I.; Pierce E.A.;
Hum. Mol. Genet. 24:230-242(2015)
Cited for: INVOLVEMENT IN RP71; VARIANTS RP71 PRO-257; GLN-1567 AND GLU-1605; CHARACTERIZATION OF VARIANTS RP71 PRO-257; GLN-1567 AND GLU-1605;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.