Variant position: 106 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 218 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human FEGRVVWNGSRGTKDLQDLS IFITNVTYNHSGDYECHVYRL
Chimpanzee FEGRVVWNGSRGTKDLQDLS IFITNVTYNHSGDYECHVYRL
Mouse FEGRVVWNGSRGTKDLQDLS IFITNVTYNHSGDYECHVYRL
Rat FEGRVVWNGSRGTKDLQDLS IFITNVTYNHSGDYECHVYRL
Bovine FEGRVVWNGSRGTKDLQDLS IFITNVTYNHSGDYECHVYRL
Rabbit FEGRVVWNGSRGTKDLQDLS IFITNVTYNHSGDYQCHVYRL
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
19 – 218 Sodium channel subunit beta-1
19 – 160 Extracellular
22 – 150 Ig-like C2-type
93 – 93 N-linked (GlcNAc...) asparagine
110 – 110 N-linked (GlcNAc...) asparagine
114 – 114 N-linked (GlcNAc...) asparagine
40 – 121
106 – 110
A homozygous mutation of voltage-gated sodium channel beta(I) gene SCN1B in a patient with Dravet syndrome.
Ogiwara I.; Nakayama T.; Yamagata T.; Ohtani H.; Mazaki E.; Tsuchiya S.; Inoue Y.; Yamakawa K.;
Cited for: VARIANT DEE52 THR-106;
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