Variant position: 1166 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 1233 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human SYKPAPFFVLDEIDAALDNT NIGKVANYIKEQSTCNFQAIV
Mouse SYKPAPFFVLDEIDAALDNT NIGKVANYIKEQSTCNFQAIV
Rat SYKPAPFFVLDEIDAALDNT NIGKVANYIKEQSTCNFQAIV
Bovine SYKPAPFFVLDEIDAALDNT NIGKVANYIKEQSTCNFQAIV
Xenopus laevis SYKPSPFFVLDEIDAALDNT NIGKVANYIKEQSMSNFQAIV
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 1233 Structural maintenance of chromosomes protein 1A
Cornelia de Lange individuals with new and recurrent SMC1A mutations enhance delineation of mutation repertoire and phenotypic spectrum.
Gervasini C.; Russo S.; Cereda A.; Parenti I.; Masciadri M.; Azzollini J.; Melis D.; Aravena T.; Doray B.; Ferrarini A.; Garavelli L.; Selicorni A.; Larizza L.;
Am. J. Med. Genet. A 161A:2909-2919(2013)
Cited for: VARIANTS CDLS2 58-VAL--ARG-62 DEL; GLY-398; MET-651; GLN-693; THR-784; GLN-790; THR-1166 AND PHE-1189;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.