Variant position: 488 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 568 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human TTTLFLPIFASMSRSIGLNP LYIMLPCTLSASFAFMLPVAT
Mouse TTTLFLPIFASMARSIGIHP LYVMIPCTMSASLAFMLPVAT
Rat TTTLFLPIFASMARSIGIHP LYVMIPCTLSASLAFMLPVAT
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 568 Solute carrier family 13 member 5
487 – 507 Helical
479 – 524 Missing. In isoform 2.
Mutations in SLC13A5 cause autosomal-recessive epileptic encephalopathy with seizure onset in the first days of life.
Thevenon J.; Milh M.; Feillet F.; St-Onge J.; Duffourd Y.; Juge C.; Roubertie A.; Heron D.; Mignot C.; Raffo E.; Isidor B.; Wahlen S.; Sanlaville D.; Villeneuve N.; Darmency-Stamboul V.; Toutain A.; Lefebvre M.; Chouchane M.; Huet F.; Lafon A.; de Saint Martin A.; Lesca G.; El Chehadeh S.; Thauvin-Robinet C.; Masurel-Paulet A.; Odent S.; Villard L.; Philippe C.; Faivre L.; Riviere J.B.;
Am. J. Hum. Genet. 95:113-120(2014)
Cited for: INVOLVEMENT IN DEE25; VARIANTS DEE25 ARG-219; MET-227 AND PRO-488;
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