Variant position: 40 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 124 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human GAEGGQGKRKRLFSKELRCM MYGFGDDQNPYTESVDILEDL
Mouse GAEGGQGKRKRLFSKELRCM MYGFGDDQNPYTESVDILEDL
Bovine GAEGGQGKRKRLFSKELRCM MYGFGDDQNPYTESVDILEDL
Slime mold ----MSTKRKRMFSKELKHM MYGFGDVREPLHESIDLLEEL
Baker's yeast --MSRKLKKTNLFNKDVSSL LYAYGDVPQPLQATVQCLDEL
Fission yeast RRGRPPTRRQHLFTKDLKSL MYAFGDDVNPAPDSINVLEEI
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 124 Transcription initiation factor TFIID subunit 13
31 – 74 Histone-fold
33 – 42
Hypomorphic Pathogenic variants in TAF13 are associated with autosomal-recessive intellectual disability and microcephaly.
Tawamie H.; Martianov I.; Wohlfahrt N.; Buchert R.; Mengus G.; Uebe S.; Janiri L.; Hirsch F.W.; Schumacher J.; Ferrazzi F.; Sticht H.; Reis A.; Davidson I.; Colombo R.; Abou Jamra R.;
Am. J. Hum. Genet. 100:555-561(2017)
Cited for: INVOLVEMENT IN MRT60; VARIANTS MRT60 HIS-31 AND LYS-40; CHARACTERIZATION OF VARIANTS MRT60 HIS-31 AND LYS-40;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.