Variant position: 120 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 143 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VLVAGFGRKGHAVGDIPGVR FKVVKVANVSLLALYKGKKER
Mouse VLVAGFGRKGHAVGDIPGVR FKVVKVANVSLLALYKGKKER
Rat VLVAGFGRKGHAVGDIPGVR FKVVKVANVSLLALYKGKKER
Pig VLVAGFGRKGHAVGDIPGVR FKVVKVANVSLLALYKGKKER
Bovine VLVAGFGRKGHAVGDIPGVR FKVVKVANVSLLALYKGKKER
Caenorhabditis elegans VLVSGFGRSGHAVGDIPGVR FKIVKVANTSLIALFKGKKER
Drosophila VLVAGFGRKGHAVGDIPGVR FKVVKVANVSLLALYKEKKER
Slime mold VLVAGLGRSGHSVGDIPGVR FKVVKVSSVSLIAIYRGIKDK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
2 – 143 40S ribosomal protein S23
135 – 135 N6-acetyllysine
120 – 125
A ribosomopathy reveals decoding defective ribosomes driving human dysmorphism.
Paolini N.A.; Attwood M.; Sondalle S.B.; Vieira C.M.; van Adrichem A.M.; di Summa F.M.; O'Donohue M.F.; Gleizes P.E.; Rachuri S.; Briggs J.W.; Fischer R.; Ratcliffe P.J.; Wlodarski M.W.; Houtkooper R.H.; von Lindern M.; Kuijpers T.W.; Dinman J.D.; Baserga S.J.; Cockman M.E.; MacInnes A.W.;
Am. J. Hum. Genet. 100:506-522(2017)
Cited for: FUNCTION; HYDROXYLATION AT PRO-62; INVOLVEMENT IN BTDD; VARIANTS BTDD LYS-67 AND ILE-120; CHARACTERIZATION OF VARIANTS BTDD LYS-67 AND ILE-120;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.