Variant position: 280 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 543 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human VVRIEGSLGQVAVSTCFSPR RAIDAVPHGTQEQDIEAASSQ
Mouse VVRIEGSLGQVAVSTCFSPR RAIDAVSHGTQEQDTGAASSQ
Xenopus laevis VVHIEGSLGQVAVSTCYSPR RAIDAVSYAMPDEAIKALGYQ
Xenopus tropicalis VVHIEGSLGQVAVSTCYSPR RAIDAVSYAMPDEAIKALGYQ
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 543 Protein PAT1 homolog 2
Biallelic Mutations in PATL2 Cause Female Infertility Characterized by Oocyte Maturation Arrest.
Chen B.; Zhang Z.; Sun X.; Kuang Y.; Mao X.; Wang X.; Yan Z.; Li B.; Xu Y.; Yu M.; Fu J.; Mu J.; Zhou Z.; Li Q.; Jin L.; He L.; Sang Q.; Wang L.;
Am. J. Hum. Genet. 101:609-615(2017)
Cited for: INVOLVEMENT IN OOMD4; SUBCELLULAR LOCATION; TISSUE SPECIFICITY; VARIANTS OOMD4 186-TYR--TYR-543 DEL; ARG-189; ASN-217; 262-ARG--TYR-543 DEL; GLN-280 AND THR-318;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.