Sequence information
Variant position: 7186 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 7388 The length of the canonical sequence.
Location on the sequence:
TVMVRVGGGWMALDEFLVKN
D PCRARGRTNIELREKFILPE
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human TVMVRVGGGWMALDEFLVKND PCRARGRTNIELREKFILPE
Mouse TVMVRVGGGWMALDEFLVKND PCRARGRTNIELREKFILPE
Rat TVMVRVGGGWMALDEFLVKND PCRARGRTNIELREKFILPE
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
Chain
1 – 7388
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
Domain
7117 – 7189
GAR
Region
7117 – 7388
C-terminal tail
Literature citations
MACF1 mutations encoding highly conserved zinc-binding residues of the GAR domain cause defects in neuronal migration and axon guidance.
Dobyns W.B.; Aldinger K.A.; Ishak G.E.; Mirzaa G.M.; Timms A.E.; Grout M.E.; Dremmen M.H.G.; Schot R.; Vandervore L.; van Slegtenhorst M.A.; Wilke M.; Kasteleijn E.; Lee A.S.; Barry B.J.; Chao K.R.; Szczaluba K.; Kobori J.; Hanson-Kahn A.; Bernstein J.A.; Carr L.; D'Arco F.; Miyana K.; Okazaki T.; Saito Y.; Sasaki M.; Das S.; Wheeler M.M.; Bamshad M.J.; Nickerson D.A.; Engle E.C.; Verheijen F.W.; Doherty D.; Mancini G.M.S.;
Am. J. Hum. Genet. 103:1009-1021(2018)
Cited for: INVOLVEMENT IN LIS9; VARIANTS LIS9 ARG-6664; PHE-7135; TYR-7186; GLY-7188 AND PHE-7188;
Disclaimer:
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.