Variant position: 1007 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: 2286 The length of the canonical sequence.
Location on the sequence:
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human SSVFEAFLKGSTLEEVYGSV AKVADYWLDVLYSKAANMPDS
Mouse SSVFEAFLKGSTLEEVYGSV AKVADYWLDVLYSKAANMPDS
Drosophila SSVFEAFLAGSTLEECYASV AKVADYWLDVLYSRGSNLPDS
Slime mold SEVFKEFLGGDSLEGCYQSV GAVANRWLDILDSHAENYEEK
Sequence annotation in neighborhood: The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
Type: the type of sequence feature. Positions: endpoints of the sequence feature. Description: contains additional information about the feature.
Type Positions Description
1 – 2286 DNA polymerase epsilon catalytic subunit A
DNA polymerase epsilon deficiency causes IMAGe syndrome with variable immunodeficiency.
Logan C.V.; Murray J.E.; Parry D.A.; Robertson A.; Bellelli R.; Tarnauskaite Z.; Challis R.; Cleal L.; Borel V.; Fluteau A.; Santoyo-Lopez J.; Aitman T.; Barroso I.; Basel D.; Bicknell L.S.; Goel H.; Hu H.; Huff C.; Hutchison M.; Joyce C.; Knox R.; Lacroix A.E.; Langlois S.; McCandless S.; McCarrier J.; Metcalfe K.A.; Morrissey R.; Murphy N.; Netchine I.; O'Connell S.M.; Olney A.H.; Paria N.; Rosenfeld J.A.; Sherlock M.; Syverson E.; White P.C.; Wise C.; Yu Y.; Zacharin M.; Banerjee I.; Reijns M.; Bober M.B.; Semple R.K.; Boulton S.J.; Rios J.J.; Jackson A.P.;
Am. J. Hum. Genet. 103:1038-1044(2018)
Cited for: VARIANTS IMAGEI 683-TYR--HIS-2286 DEL; PRO-1007 AND 1980-TRP--HIS-2286 DEL; INVOLVEMENT IN IMAGEI;
Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.