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UniProtKB/Swiss-Prot Q9Y3I1: Variant p.Leu34Arg

F-box only protein 7
Gene: FBXO7
Variant information

Variant position:  34
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Type of variant:  US
The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change:  From Leucine (L) to Arginine (R) at position 34 (L34R, p.Leu34Arg).
Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.

Physico-chemical properties:  Change from medium size and hydrophobic (L) to large size and basic (R)
The physico-chemical property of the reference and variant residues and the change implicated.

BLOSUM score:  -2
The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description:  In PARK15; unknown pathological significance.
Any additional useful information about the variant.



Sequence information

Variant position:  34
The position of the amino-acid change on the UniProtKB canonical protein sequence.

Protein sequence length:  522
The length of the canonical sequence.

Location on the sequence:   LEVPETEPTLGHLRSHLRQS  L LCTWGYSSNTRFTITLNYKD
The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.

Residue conservation: 
The multiple alignment of the region surrounding the variant against various orthologous sequences.

Human                         LEVPETEPTLGHLRSHLRQSLLCTWGYSSNTRFTITLNYKD

Mouse                         LEVPESEPTLGQLRAHLSQVLLPTLGFSSDTRFAITLNNKD

Rat                           LEVPESEPTLGQLRAHLIQDLLPTLGFSSDTRFAITLNNKD

Bovine                        LDMPEVEPTLGQLRAYLSQAL-PTWGYSSDARFAITLNNKD

Sequence annotation in neighborhood:  
The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.

TypePositionsDescription
Chain 1 – 522 F-box only protein 7
Region 1 – 88 Ubiquitin-like
Alternative sequence 1 – 114 Missing. In isoform 3.
Alternative sequence 1 – 79 Missing. In isoform 2.
Mutagenesis 22 – 22 T -> M. Impairs interaction with PRKN.


Literature citations

Segregation of ATP10B variants in families with autosomal recessive parkinsonism.
Tesson C.; Lohmann E.; Devos D.; Bertrand H.; Lesage S.; Brice A.;
Acta Neuropathol. 140:783-785(2020)
Cited for: VARIANT PARK15 ARG-34;

Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.