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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot O96000: Variant p.Cys107Ser

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10
Gene: NDUFB10
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Variant information Variant position: help 107 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Cysteine (C) to Serine (S) at position 107 (C107S, p.Cys107Ser). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from medium size and polar (C) to small size and polar (S) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In MC1DN35; decreased protein abundance; decreased CHCHD4-mediated oxidation; loss of mitochondrial localization; retained in the cytosol; loss of function in mitochondrial respiratory chain complex I assembly. Any additional useful information about the variant.


Sequence information Variant position: help 107 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 172 The length of the canonical sequence.
Location on the sequence: help KRDYKVDQEIINIMQDRLKA C QQREGQNYQQNCIKEVEQFT The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         KRDYKVDQEIINIMQDRLKACQQREGQNYQQNCIKEVEQFT

Gorilla                       RRDYKVDQEIINIMQDRLKACQQREGQNYQQNCIKEVEQFT

Chimpanzee                    RRDYKVDQEIINIMQDRLKACQQREGQNYQQNCIKEVEQFT

Mouse                         RRDFKVDQEIMNIIQERLKACQQREGENYQQNCAKELEQFT

Bovine                        RRDYKVDQEIVNIIQERLKACQQREGESHRQNCAKELEQFT
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 172 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10



Literature citations
Mutations in the accessory subunit NDUFB10 result in isolated complex I deficiency and illustrate the critical role of intermembrane space import for complex I holoenzyme assembly.
Friederich M.W.; Erdogan A.J.; Coughlin C.R. II; Elos M.T.; Jiang H.; O'Rourke C.P.; Lovell M.A.; Wartchow E.; Gowan K.; Chatfield K.C.; Chick W.S.; Spector E.B.; Van Hove J.L.K.; Riemer J.;
Hum. Mol. Genet. 26:702-716(2017)
Cited for: FUNCTION; SUBCELLULAR LOCATION; INTERACTION WITH CHCHD4; DISULFIDE BOND; INVOLVEMENT IN MC1DN35; VARIANT MC1DN35 SER-107; CHARACTERIZATION OF VARIANT MC1DN35 SER-107;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.