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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot O43681: Variant p.Cys289Trp

ATPase GET3
Gene: GET3
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Variant information Variant position: help 289 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Cysteine (C) to Tryptophan (W) at position 289 (C289W, p.Cys289Trp). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from medium size and polar (C) to large size and aromatic (W) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -2 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In CMD2H; when associated in cis with 305-Q--Q-348 del. Any additional useful information about the variant.


Sequence information Variant position: help 289 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 348 The length of the canonical sequence.
Location on the sequence: help KIDTHNIIVNQLVFPDPEKP C KMCEARHKIQAKYLDQMEDL The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         KIDTHNIIVNQLVFP--DPEKPCKMCEARHKIQAKYLDQMEDL

Mouse                         KIDTHNIIVNQLVFP--DPEKPCKMCEARHKIQAKYLDQME

Rat                           KIDTHNIIVNQLVFP--DPEKPCKMCEARHKIQAKYLDQME

Bovine                        KIDTHNIIVNQLVFP--DPEKPCKMCEARHKIQAKYLDQME

Xenopus laevis                SIDTHNIIVNQLVFP--DPEKPCRMCEARHKIQSKYLDQME

Xenopus tropicalis            SIDTHNIIVNQLVFP--EPEKPCRMCEARHKIQSKYLDQME

Zebrafish                     RIDTHNIIVNQLVFP--DNERPCKMCEARHKIQSKYLDQME

Baker's yeast                 DMDVNSIIVNQLLFAENDQEHNCKRCQARWKMQKKYLDQID

Fission yeast                 EIDTHNIVVNQLLL---DPNTTCPQCMARRKMQQKYLAQIE
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 2 – 348 ATPase GET3
Binding site 278 – 278
Binding site 289 – 289
Binding site 292 – 292



Literature citations
Biallelic variants in ASNA1, encoding a cytosolic targeting factor of tail-anchored proteins, cause rapidly progressive pediatric cardiomyopathy.
Verhagen J.M.A.; van den Born M.; van der Linde H.C.; Nikkels P.G.J.; Verdijk R.M.; Kivlen M.H.; van Unen L.M.A.; Baas A.F.; Ter Heide H.; van Osch-Gevers L.; Hoogeveen-Westerveld M.; Herkert J.C.; Bertoli-Avella A.M.; van Slegtenhorst M.A.; Wessels M.W.; Verheijen F.W.; Hassel D.; Hofstra R.M.W.; Hegde R.S.; van Hasselt P.M.; van Ham T.J.; van de Laar I.M.B.H.;
Circ. Genom. Precis. Med. 12:397-406(2019)
Cited for: INVOLVEMENT IN CMD2H; VARIANTS CMD2H ALA-163; TRP-289 AND 305-GLN--GLN-348 DEL; SUBCELLULAR LOCATION; FUNCTION;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.