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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot Q9UPQ8: Variant p.Trp304Cys

Dolichol kinase
Gene: DOLK
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Variant information Variant position: help 304 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Tryptophan (W) to Cysteine (C) at position 304 (W304C, p.Trp304Cys). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from large size and aromatic (W) to medium size and polar (C) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -2 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In CDG1M; decreased dolichol kinase activity; fails to complement the temperature-sensitive phenotype of DK1-deficient yeast cells. Any additional useful information about the variant.
Other resources: help Links to websites of interest for the variant.


Sequence information Variant position: help 304 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 538 The length of the canonical sequence.
Location on the sequence: help LLWLLQFLFQTDTRIYLLAY W SLLATLACLVVLYQNAKRSS The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         LLWLLQFLF---QTDTRIYLLAYWSLLATLACLVVLYQNAKRSS

Mouse                         LLWLLQFLF---YTETRIYLLAYWSLLASVACLVVLYQNAK

Bovine                        LLWLFQFLF---QTETRVYLLAYWCLLATVACLVVLYQNAK

Baker's yeast                 LLWLVKYIL---ESTIRQKILFAWSSILILSIPSILIEK--

Fission yeast                 EVWLFNQIFSHRNSLTRIKIIIWW--IICLGCFIFILLRSN
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 1 – 538 Dolichol kinase
Transmembrane 298 – 318 Helical; Name=9



Literature citations
Autosomal recessive dilated cardiomyopathy due to DOLK mutations results from abnormal dystroglycan O-mannosylation.
Lefeber D.J.; de Brouwer A.P.; Morava E.; Riemersma M.; Schuurs-Hoeijmakers J.H.; Absmanner B.; Verrijp K.; van den Akker W.M.; Huijben K.; Steenbergen G.; van Reeuwijk J.; Jozwiak A.; Zucker N.; Lorber A.; Lammens M.; Knopf C.; van Bokhoven H.; Gruenewald S.; Lehle L.; Kapusta L.; Mandel H.; Wevers R.A.;
PLoS Genet. 7:e1002427-e1002427(2011)
Cited for: VARIANTS CDG1M CYS-304 AND ASP-408; CHARACTERIZATION OF VARIANTS CDG1M SER-99 CYS-304; ASP-408 AND SER-441; FUNCTION; CATALYTIC ACTIVITY;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.