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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot Q8WWV3: Variant p.Ser167Phe

NAD(P)H oxidoreductase RTN4IP1, mitochondrial
Gene: RTN4IP1
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Variant information Variant position: help 167 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help US The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance

Residue change: help From Serine (S) to Phenylalanine (F) at position 167 (S167F, p.Ser167Phe). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Change from small size and polar (S) to large size and aromatic (F) The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help -2 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page

Variant description: help In OPA10; uncertain significance. Any additional useful information about the variant.


Sequence information Variant position: help 167 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 396 The length of the canonical sequence.
Location on the sequence: help VPPWKQGTLSEFVVVSGNEV S HKPKSLTHTQAASLPYVALT The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences.
Human                         VPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALT

Mouse                         VPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALT

Bovine                        VPPWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALT

Zebrafish                     IPPWKQGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAAT

Caenorhabditis elegans        VPVILPGTHAEFVVTDSKYCSKKPSNLSFVSAAALPYVAST

Slime mold                    SPPFSMGSHCEYITVDESEISLKPKNLTHQQSASIPFASLT

Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 41 – 396 NAD(P)H oxidoreductase RTN4IP1, mitochondrial
Domain 52 – 393 Enoyl reductase (ER)
Beta strand 166 – 168



Literature citations
Neurologic Phenotypes Associated With Mutations in RTN4IP1 (OPA10) in Children and Young Adults.
Charif M.; Nasca A.; Thompson K.; Gerber S.; Makowski C.; Mazaheri N.; Bris C.; Goudenege D.; Legati A.; Maroofian R.; Shariati G.; Lamantea E.; Hopton S.; Ardissone A.; Moroni I.; Giannotta M.; Siegel C.; Strom T.M.; Prokisch H.; Vignal-Clermont C.; Derrien S.; Zanlonghi X.; Kaplan J.; Hamel C.P.; Leruez S.; Procaccio V.; Bonneau D.; Reynier P.; White F.E.; Hardy S.A.; Barbosa I.A.; Simpson M.A.; Vara R.; Perdomo Trujillo Y.; Galehdari H.; Deshpande C.; Haack T.B.; Rozet J.M.; Taylor R.W.; Ghezzi D.; Amati-Bonneau P.; Lenaers G.;
JAMA Neurol. 75:105-113(2018)
Cited for: VARIANTS OPA10 ILE-43; CYS-51; HIS-103; SER-105; 144-TRP--VAL-396 DEL; PHE-167; GLU-321; PRO-356 AND PHE-362;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.