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UniProtKB/Swiss-Prot variant pages

UniProtKB/Swiss-Prot P18754: Variant p.Val261Met

Regulator of chromosome condensation
Gene: RCC1
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Variant information Variant position: help 261 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Type of variant: help LP/P [Disclaimer] The variants are classified into three categories: LP/P, LB/B and US.
  • LP/P: likely pathogenic or pathogenic.
  • LB/B: likely benign or benign.
  • US: uncertain significance
Residue change: help From Valine (V) to Methionine (M) at position 261 (V261M, p.Val261Met). Indicates the amino acid change of the variant. The one-letter and three-letter codes for amino acids used in UniProtKB/Swiss-Prot are those adopted by the commission on Biochemical Nomenclature of the IUPAC-IUB.
Physico-chemical properties: help Similar physico-chemical property. Both residues are medium size and hydrophobic. The physico-chemical property of the reference and variant residues and the change implicated.
BLOSUM score: help 1 The score within a Blosum matrix for the corresponding wild-type to variant amino acid change. The log-odds score measures the logarithm for the ratio of the likelihood of two amino acids appearing by chance. The Blosum62 substitution matrix is used. This substitution matrix contains scores for all possible exchanges of one amino acid with another:
  • Lowest score: -4 (low probability of substitution).
  • Highest score: 11 (high probability of substitution).
More information can be found on the following page
Variant description: help In IIAAN; likely pathogenic; reduced thermal stability. Any additional useful information about the variant.


Sequence information Variant position: help 261 The position of the amino-acid change on the UniProtKB canonical protein sequence.
Protein sequence length: help 421 The length of the canonical sequence.
Location on the sequence: help RFQDAFCGAYFTFAISHEGH V YGFGLSNYHQLGTPGTESCF The residue change on the sequence. Unless the variant is located at the beginning or at the end of the protein sequence, both residues upstream (20) and downstream (20) of the variant will be shown.
Residue conservation: help The multiple alignment of the region surrounding the variant against various orthologous sequences. 
Human                         RFQDAFCGAYFTFAISHEGHVYGF--GLSNYHQLGTP----GTE---------SCF

Mouse                         RFQDAFCGAYFTFAISREGHVYGF--GLSNYHQLGTP----

Xenopus laevis                HFQDVFCGAYFTFAVSQEGHVYGF--GLSNYHQLGTK----

Caenorhabditis elegans        VAKNVFASGFWTIVHGEDGKYYAF--GLNNYAQLGIKVDEA

Drosophila                    -FEAIWATNYCTFMRESQTQVI-WATGLNNFKQLAHE----

Baker's yeast                 -VKYIASGENHCFALTKDNKLVSW--GLNQFGQCGVS-EDV

Fission yeast                 -IISVGAGSYHSFAIDNKGRVYAW--GLNITRQCGIEVEDE
Sequence annotation in neighborhood: help The regions or sites of interest surrounding the variant. In general the features listed are posttranslational modifications, binding sites, enzyme active sites, local secondary structure or other characteristics reported in the cited references. The "Sequence annotation in neighborhood" lines have a fixed format:
  • Type: the type of sequence feature.
  • Positions: endpoints of the sequence feature.
  • Description: contains additional information about the feature.
TypePositionsDescription
Chain 2 – 421 Regulator of chromosome condensation
Repeat 258 – 311 RCC1 5
Beta strand 261 – 265



Literature citations
Acute-onset axonal neuropathy following infection in children with biallelic RCC1 variants: a case series.
Harkness J.R.; McDermott J.H.; Marsden S.; Jamieson P.; Metcalfe K.A.; Khan N.; Macken W.L.; Pitceathly R.D.S.; Record C.J.; Maroofian R.; Kleopa K.; Christodoulou K.; Sabir A.; Islam L.; Santra S.; Durmusalioglu E.A.; Atik T.; Isik E.; Cogulu O.; Urquhart J.E.; Beaman G.M.; Demain L.A.; Jackson A.; Blakes A.J.M.; Byers H.J.; Bennett H.; Lin W.H.; Adamson A.; Patel S.; Yue W.W.; Taylor R.W.; Reunert J.; Marquardt T.; Buchert R.; Haack T.; Losch H.; Ryba L.; Lassuthova P.; Valkovicova R.; Haberlova J.; Lauerova B.; Trusikova E.; Polavarapu K.; Kilicarslan O.A.; Lochmueller H.; Zamani M.; Chamanrou N.; Shariati G.; Sadeghian S.; Azizimalamiri R.; Maddirevula S.; AlMuhaizea M.; Alkuraya F.S.; Horvath R.; Gungor S.; Manzur A.; Munot P.; Matthews R.; Banka S.; Reilly M.M.; Bennett D.; O'Keefe R.T.; Newman W.G.;
Lancet Neurol. 24:667-680(2025)
Cited for: VARIANTS IIAAN SER-43; ALA-70; MET-80; ASP-94; ILE-110; SER-202; MET-261 AND CYS-399; CHARACTERIZATION OF VARIANTS IIAAN SER-43; ALA-70 AND MET-261; INVOLVEMENT IN IIAAN;
Disclaimer: Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. They are not in any way intended to be used as a substitute for professional medical advice, diagnostic, treatment or care.